STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_07597Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (783 aa)    
Predicted Functional Partners:
PV09_06370
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
   
 0.978
PV09_09133
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
   
 0.968
PV09_09694
Citrate synthase; Belongs to the citrate synthase family.
  
 0.963
PV09_00289
Citrate synthase; Belongs to the citrate synthase family.
  
 0.963
PV09_08934
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component.
   
 
 0.956
PV09_00688
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.943
PV09_01602
NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial; Belongs to the complex I 49 kDa subunit family.
   
 
 0.922
PV09_04773
Uncharacterized protein.
  
 0.915
PV09_05524
Cytochrome c1, heme protein, mitochondrial.
   
 0.908
PV09_07860
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
  
 0.906
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.