STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_04296Uncharacterized protein. (183 aa)    
Predicted Functional Partners:
PV09_08896
Mitochondrial import inner membrane translocase subunit tim9.
   
  
 0.615
PV09_06394
CHCH domain-containing protein.
   
 
 0.574
PV09_06350
Uncharacterized protein.
   
  
 0.559
PV09_05864
Uncharacterized protein.
   
  
 0.554
PV09_08571
DNA-directed RNA polymerase I, II, and III subunit RPABC5.
   
   0.535
PV09_03635
Sulfhydryl oxidase.
   
  
 0.518
PV09_06349
COX assembly mitochondrial protein; Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration; Belongs to the CMC family.
   
  
 0.492
PV09_05747
Ribosomal protein S18; Belongs to the bacterial ribosomal protein bS18 family.
   
  
 0.446
PV09_02745
Methyltransf_11 domain-containing protein.
      
 0.437
PV09_01730
Uncharacterized protein.
      
 0.426
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.