STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_01995Amidase domain-containing protein. (673 aa)    
Predicted Functional Partners:
PV09_03573
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
 0.930
PV09_02233
Aspartate-tRNA ligase.
  
 0.750
PV09_05379
Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.612
PV09_08277
Glutamine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.583
PV09_07061
Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.583
PV09_00404
Uncharacterized protein.
  
 0.583
PV09_01539
Carbamoyl-phosphate synthase arginine-specific large chain.
   
 
  0.571
PV09_07989
Protein pyrABCN.
   
 
  0.571
PV09_06331
Carbamoyl-phosphate synthase arginine-specific small chain.
   
 
  0.571
PV09_05859
Asparagine-tRNA ligase.
   
 0.553
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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