STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_00337GYF domain-containing protein. (458 aa)    
Predicted Functional Partners:
PV09_04959
Uncharacterized protein.
   
 
 0.986
PV09_01238
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
 0.955
PV09_09113
Pre-mRNA-splicing ATP-dependent RNA helicase prp28; Belongs to the DEAD box helicase family.
   
 
 0.941
PV09_00446
Pre-mRNA-processing-splicing factor 8, variant.
    
 
 0.939
PV09_05690
Uncharacterized protein.
   
 
 0.936
PV09_06896
Sm domain-containing protein.
    
 
 0.922
PV09_02927
Uncharacterized protein.
   
 
 0.910
PV09_04734
Tr-type G domain-containing protein.
    
 
 0.908
PV09_01234
Uncharacterized protein.
   
 
 0.825
PV09_01444
Sm domain-containing protein.
    
 
 0.822
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.