STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_07414TPR_REGION domain-containing protein. (852 aa)    
Predicted Functional Partners:
PV09_00214
WD_REPEATS_REGION domain-containing protein.
    
 0.974
PV09_09836
WD_REPEATS_REGION domain-containing protein.
    
 0.974
PV09_03506
WD_REPEATS_REGION domain-containing protein.
    
 0.926
PV09_01546
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
 
 
   0.915
PV09_06343
BZIP domain-containing protein.
    
 0.885
PV09_05157
Uncharacterized protein.
    
 0.871
PV09_06192
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.871
PV09_03833
AflR domain-containing protein.
   
 
 0.863
PV09_00024
Uncharacterized protein.
    
 0.839
PV09_06399
WD_REPEATS_REGION domain-containing protein.
    
 0.827
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.