STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_04930Uncharacterized protein. (266 aa)    
Predicted Functional Partners:
PV09_02537
Ribosomal protein L2.
   
   0.754
PV09_07624
Ribosomal protein S2.
   
   0.734
PV09_09115
Uncharacterized protein.
   
 
 0.727
PV09_01383
Uncharacterized protein.
   
 
 0.727
PV09_07468
Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.719
PV09_02579
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.705
PV09_08167
50S ribosomal protein L4.
   
 
 0.704
PV09_00660
RNase III domain-containing protein.
   
 
 0.702
PV09_00595
Ribosomal protein S15.
   
   0.701
PV09_00954
Ribosomal protein L13.
   
 
 0.699
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.