PV09_03410 protein (Verruconis gallopava) - STRING interaction network

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second shell of interactors

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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gene co-occurrence

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co-expression

protein homology

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Score

PV09_03410

Uncharacterized protein. (2284 aa)

Predicted Functional Partners:

PV09_00421

0.621

PV09_07893

0.592

PV09_02086

0.569

PV09_04833

0.557

PV09_07663

0.545

PV09_02130

0.518

PV09_00248

0.507

PV09_05856

0.498

PV09_04450

0.494

PV09_00827

0.491

Your Current Organism:

Verruconis gallopava

NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV09_00248	PV09_00827	A0A0D1Z8K3	A0A0D2AQH1	26S proteasome regulatory subunit rpn11.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.507
PV09_00248	PV09_02086	A0A0D1Z8K3	A0A0D2B7J9	26S proteasome regulatory subunit rpn11.	Uncharacterized protein.	0.496
PV09_00248	PV09_03410	A0A0D1Z8K3	A0A0D2AG95	26S proteasome regulatory subunit rpn11.	Uncharacterized protein.	0.507
PV09_00248	PV09_04833	A0A0D1Z8K3	A0A0D1YTQ6	26S proteasome regulatory subunit rpn11.	Uncharacterized protein.	0.428
PV09_00421	PV09_00827	A0A0D2AS87	A0A0D2AQH1	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.547
PV09_00421	PV09_02086	A0A0D2AS87	A0A0D2B7J9	Uncharacterized protein.	Uncharacterized protein.	0.424
PV09_00421	PV09_03410	A0A0D2AS87	A0A0D2AG95	Uncharacterized protein.	Uncharacterized protein.	0.621
PV09_00827	PV09_00248	A0A0D2AQH1	A0A0D1Z8K3	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	26S proteasome regulatory subunit rpn11.	0.507
PV09_00827	PV09_00421	A0A0D2AQH1	A0A0D2AS87	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.547
PV09_00827	PV09_02086	A0A0D2AQH1	A0A0D2B7J9	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.569
PV09_00827	PV09_02130	A0A0D2AQH1	A0A0D1XWU5	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.451
PV09_00827	PV09_03410	A0A0D2AQH1	A0A0D2AG95	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.491
PV09_00827	PV09_04833	A0A0D2AQH1	A0A0D1YTQ6	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.616
PV09_00827	PV09_05856	A0A0D2AQH1	A0A0D2AUG9	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.498
PV09_00827	PV09_07663	A0A0D2AQH1	A0A0D2A3E1	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.492
PV09_02086	PV09_00248	A0A0D2B7J9	A0A0D1Z8K3	Uncharacterized protein.	26S proteasome regulatory subunit rpn11.	0.496
PV09_02086	PV09_00421	A0A0D2B7J9	A0A0D2AS87	Uncharacterized protein.	Uncharacterized protein.	0.424
PV09_02086	PV09_00827	A0A0D2B7J9	A0A0D2AQH1	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.569
PV09_02086	PV09_03410	A0A0D2B7J9	A0A0D2AG95	Uncharacterized protein.	Uncharacterized protein.	0.569
PV09_02086	PV09_07663	A0A0D2B7J9	A0A0D2A3E1	Uncharacterized protein.	Uncharacterized protein.	0.453

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Network Stats

number of nodes:

11

number of edges:

46

average node degree:

8.36

avg. local clustering coefficient:

0.982

expected number of edges:

28

PPI enrichment p-value:

0.000982

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:3842

Mixed, incl. PAS-associated, C-terminal, and Double Cache domain 1

3 of 10

2.02

1.25

0.0040

CL:4302

Mixed, incl. Sister chromatid cohesion, and Oxoprolinase family

3 of 23

1.66

1.04

0.0069

CL:3845

Signal transduction histidine kinase, dimerisation/phosphoacceptor domain, and GAF domain

2 of 5

2.15

1.01

0.0128

CL:3830

Signal transduction, and PAC motif

4 of 60

1.37

0.93

0.0067

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR003661

Signal transduction histidine kinase, dimerisation/phosphoacceptor domain

3 of 14

1.88

0.91

0.0175

IPR036097

Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily

3 of 16

1.82

0.9

0.0175

IPR004358

Signal transduction histidine kinase-related protein, C-terminal

3 of 22

1.68

0.85

0.0195

IPR001610

PAC motif

2 of 4

2.25

0.8

0.0338

IPR005467

Histidine kinase domain

3 of 27

1.59

0.78

0.0256

(more ...)

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00388

His Kinase A (phosphoacceptor) domain

3 of 15

1.85

1.37

0.0017

SM00086

Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)

2 of 6

2.07

1.09

0.0086

SM00387

Histidine kinase-like ATPases

3 of 34

1.49

0.96

0.0079

SM00304

HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain

2 of 14

1.7

0.79

0.0273

SM00091

PAS domain

2 of 19

1.57

0.7

0.0379

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