STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_03155SH3 domain-containing protein. (1262 aa)    
Predicted Functional Partners:
PV09_08007
Uncharacterized protein.
   
 0.998
PV09_00854
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.872
PV09_05610
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.832
PV09_03185
Uncharacterized protein.
   
 0.819
PV09_07866
Peptidyl-prolyl cis-trans isomerase.
   
 0.800
PV09_01957
WD_REPEATS_REGION domain-containing protein.
    
 0.788
PV09_05578
Uncharacterized protein.
    
  0.784
PV09_08613
Uncharacterized protein.
   
 0.782
PV09_05149
Uncharacterized protein.
    
 0.780
PV09_02882
SKIP_SNW domain-containing protein.
    
 0.780
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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