STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_02990Uncharacterized protein. (337 aa)    
Predicted Functional Partners:
PV09_05170
Uncharacterized protein.
     
 0.821
PV09_02594
Uncharacterized protein.
     
 0.821
PV09_05336
TLC domain-containing protein.
    
 0.805
PV09_04289
TLC domain-containing protein.
    
 0.805
PV09_03505
Endo/exonuclease/phosphatase domain-containing protein.
    
 0.801
PV09_02342
DAGKc domain-containing protein.
    
 0.794
PV09_03818
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
   
 
 0.765
PV09_07951
acidPPc domain-containing protein.
     
 0.755
PV09_02173
Uncharacterized protein.
     
 0.754
PV09_08640
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
     
 0.751
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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