STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_01558Uncharacterized protein. (97 aa)    
Predicted Functional Partners:
PV09_05257
Ribosomal protein L15.
   
   0.909
PV09_09018
50S ribosomal protein L3.
   
 
 0.884
PV09_01650
Uncharacterized protein.
   
 
 0.843
PV09_09103
Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.819
PV09_08912
Uncharacterized protein.
   
 
 0.814
PV09_02523
Uncharacterized protein.
   
 
 0.804
PV09_08922
37S ribosomal protein mrp10, mitochondrial; Involved in mitochondrial genome encoded proteins translation.
   
 
 0.791
PV09_02321
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.782
PV09_02324
Uncharacterized protein.
   
 
 0.782
PV09_05147
L51_S25_CI-B8 domain-containing protein.
   
 
 0.752
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.