STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_01822Uncharacterized protein. (1030 aa)    
Predicted Functional Partners:
PV09_08050
Uncharacterized protein.
   
  0.723
PV09_01976
Uncharacterized protein.
   
  0.723
PV09_06560
USP domain-containing protein; Belongs to the peptidase C19 family.
  
 
  0.702
PV09_09589
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
  0.673
PV09_08147
OGFr_N domain-containing protein.
    
 0.633
PV09_08689
Protein kinase gsk3, variant; Belongs to the protein kinase superfamily.
    
 0.633
PV09_02202
Uncharacterized protein.
    
  0.627
PV09_00435
Uncharacterized protein.
    
  0.627
PV09_07659
USP domain-containing protein.
    
  0.627
PV09_02210
Uncharacterized protein; Belongs to the peptidase C19 family.
    
  0.627
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.