STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_01099CMP/dCMP-type deaminase domain-containing protein. (188 aa)    
Predicted Functional Partners:
PV09_03679
SET domain-containing protein.
   
 0.982
PV09_09332
CMP/dCMP-type deaminase domain-containing protein.
   
 0.974
PV09_03133
Thymidylate synthase, variant.
  
 
 0.739
PV09_01704
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
 0.651
PV09_02772
Xanthine dehydrogenase.
    
 0.633
PV09_07341
ATP_bind_3 domain-containing protein.
  
 
 0.589
PV09_01982
Thymidylate kinase, variant.
  
 
 0.566
PV09_02061
Uncharacterized protein.
  
 
 0.566
PV09_00326
N-acetyl-gamma-glutamyl-phosphate reductase, variant; In the N-terminal section; belongs to the acetylglutamate kinase family.
    
  0.548
PV09_00284
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.547
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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