STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_00939U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (265 aa)    
Predicted Functional Partners:
PV09_03326
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
PV09_05805
DRIM domain-containing protein.
   
 0.999
PV09_03623
WD_REPEATS_REGION domain-containing protein.
   
  0.999
PV09_07419
WD_REPEATS_REGION domain-containing protein.
   
 0.999
PV09_05922
Uncharacterized protein.
   
 0.999
PV09_04862
CBF domain-containing protein.
   
  0.999
PV09_02329
Sas10 domain-containing protein.
   
 0.999
PV09_01865
Uncharacterized protein.
   
 0.999
PV09_02818
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.998
PV09_01811
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
  0.998
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.