STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_02852Uncharacterized protein; Belongs to the DapA family. (326 aa)    
Predicted Functional Partners:
PV09_07272
Tryptophan synthase.
    
  0.800
PV09_03320
L-galactonate dehydratase.
     
 0.706
PV09_05323
Glutamate-cysteine ligase.
    
 0.677
PV09_03906
Aminotran_5 domain-containing protein.
   
 
 0.674
PV09_07453
Aspartate aminotransferase.
   
 0.652
PV09_03309
Aspartate aminotransferase.
   
  0.648
PV09_00478
Malate synthase; Belongs to the malate synthase family.
   
 
 0.627
PV09_08202
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.625
PV09_00288
Isocitrate lyase.
   
 
  0.615
PV09_06694
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.613
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.