STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_02169DNA_LIGASE_A3 domain-containing protein. (1037 aa)    
Predicted Functional Partners:
PV09_02679
ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.
   
 0.973
PV09_07490
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.894
PV09_01639
Vezatin domain-containing protein.
   
 0.894
PV09_06198
Zn(2)-C6 fungal-type domain-containing protein.
   
 0.884
PV09_07855
Zn(2)-C6 fungal-type domain-containing protein.
   
 0.884
PV09_06606
SAP domain-containing protein.
   
 0.884
PV09_06595
BRCT domain-containing protein.
  
 0.856
PV09_03753
Polynucleotide kinase 3'-phosphatase.
   
 0.802
PV09_07622
Uncharacterized protein.
   
 0.797
PV09_01154
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.794
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.