STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylAXylose isomerase; Belongs to the xylose isomerase family. (390 aa)    
Predicted Functional Partners:
xylB
Xylulokinase.
 
 
 0.999
EFL14991.1
Xylulokinase; Belongs to the FGGY kinase family.
 
 
 0.983
EFL15506.1
Predicted protein.
     
 0.965
EFL13311.1
Predicted protein.
 
  
 0.947
EFL14521.1
Fructokinase.
 
  
 0.915
EFL14715.1
Glucokinase.
    
 0.902
EFL16605.1
Sugar kinase.
    
 0.902
EFL18043.1
Predicted protein.
    
 0.902
EFL18490.1
Sugar kinase; Overlaps another CDS with the same product name.
    
 0.902
EFL13201.1
UDP-glucose/GDP-mannose family dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
     
 0.899
Your Current Organism:
Streptomyces sp. C
NCBI taxonomy Id: 253839
Other names: S. sp. C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.