Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL13159.1 | EFL13372.1 | SSNG_00411 | SSNG_00624 | gntR-family transcriptional regulator. | GntR family transcriptional regulator. | 0.756 |
EFL13159.1 | EFL13387.1 | SSNG_00411 | SSNG_00639 | gntR-family transcriptional regulator. | Thiamine ABC transporter, ATP-binding protein. | 0.680 |
EFL13371.1 | EFL13372.1 | SSNG_00623 | SSNG_00624 | Predicted protein. | GntR family transcriptional regulator. | 0.774 |
EFL13371.1 | EFL13387.1 | SSNG_00623 | SSNG_00639 | Predicted protein. | Thiamine ABC transporter, ATP-binding protein. | 0.768 |
EFL13371.1 | EFL13388.1 | SSNG_00623 | SSNG_00640 | Predicted protein. | GntR family transcriptional regulator. | 0.662 |
EFL13372.1 | EFL13159.1 | SSNG_00624 | SSNG_00411 | GntR family transcriptional regulator. | gntR-family transcriptional regulator. | 0.756 |
EFL13372.1 | EFL13371.1 | SSNG_00624 | SSNG_00623 | GntR family transcriptional regulator. | Predicted protein. | 0.774 |
EFL13372.1 | EFL13387.1 | SSNG_00624 | SSNG_00639 | GntR family transcriptional regulator. | Thiamine ABC transporter, ATP-binding protein. | 0.587 |
EFL13372.1 | EFL19223.1 | SSNG_00624 | SSNG_06475 | GntR family transcriptional regulator. | Predicted protein. | 0.530 |
EFL13387.1 | EFL13159.1 | SSNG_00639 | SSNG_00411 | Thiamine ABC transporter, ATP-binding protein. | gntR-family transcriptional regulator. | 0.680 |
EFL13387.1 | EFL13371.1 | SSNG_00639 | SSNG_00623 | Thiamine ABC transporter, ATP-binding protein. | Predicted protein. | 0.768 |
EFL13387.1 | EFL13372.1 | SSNG_00639 | SSNG_00624 | Thiamine ABC transporter, ATP-binding protein. | GntR family transcriptional regulator. | 0.587 |
EFL13387.1 | EFL13388.1 | SSNG_00639 | SSNG_00640 | Thiamine ABC transporter, ATP-binding protein. | GntR family transcriptional regulator. | 0.918 |
EFL13387.1 | EFL17931.1 | SSNG_00639 | SSNG_05183 | Thiamine ABC transporter, ATP-binding protein. | Predicted protein. | 0.526 |
EFL13387.1 | EFL19223.1 | SSNG_00639 | SSNG_06475 | Thiamine ABC transporter, ATP-binding protein. | Predicted protein. | 0.718 |
EFL13387.1 | dnaJ | SSNG_00639 | SSNG_02305 | Thiamine ABC transporter, ATP-binding protein. | Chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.454 |
EFL13387.1 | dnaK | SSNG_00639 | SSNG_03346 | Thiamine ABC transporter, ATP-binding protein. | Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.515 |
EFL13387.1 | fusA-2 | SSNG_00639 | SSNG_05636 | Thiamine ABC transporter, ATP-binding protein. | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] | 0.482 |
EFL13387.1 | rpsK | SSNG_00639 | SSNG_04240 | Thiamine ABC transporter, ATP-binding protein. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.503 |
EFL13388.1 | EFL13371.1 | SSNG_00640 | SSNG_00623 | GntR family transcriptional regulator. | Predicted protein. | 0.662 |
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