Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL13789.1 | EFL13843.1 | SSNG_01041 | SSNG_01095 | Predicted protein. | 8-amino-7-oxononanoate synthase. | 0.757 |
EFL13789.1 | EFL16049.1 | SSNG_01041 | SSNG_03301 | Predicted protein. | 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.773 |
EFL13789.1 | EFL16164.1 | SSNG_01041 | SSNG_03416 | Predicted protein. | 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.773 |
EFL13789.1 | EFL16771.1 | SSNG_01041 | SSNG_04023 | Predicted protein. | Adenosylmethionine-8-amino-7-oxononanoate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.839 |
EFL13789.1 | EFL17167.1 | SSNG_01041 | SSNG_04419 | Predicted protein. | biotin-[acetyl-CoA-carboxylase] ligase. | 0.469 |
EFL13789.1 | EFL17932.1 | SSNG_01041 | SSNG_05184 | Predicted protein. | Adenosylmethionine-8-amino-7-oxononanoate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.773 |
EFL13789.1 | bioA | SSNG_01041 | SSNG_01097 | Predicted protein. | Adenosylmethionine-8-amino-7-oxononanoate transaminase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.925 |
EFL13789.1 | bioB | SSNG_01041 | SSNG_01096 | Predicted protein. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.867 |
EFL13789.1 | bioD | SSNG_01041 | SSNG_01098 | Predicted protein. | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.912 |
EFL13789.1 | kbl | SSNG_01041 | SSNG_00814 | Predicted protein. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.745 |
EFL13843.1 | EFL13789.1 | SSNG_01095 | SSNG_01041 | 8-amino-7-oxononanoate synthase. | Predicted protein. | 0.757 |
EFL13843.1 | EFL16049.1 | SSNG_01095 | SSNG_03301 | 8-amino-7-oxononanoate synthase. | 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.666 |
EFL13843.1 | EFL16164.1 | SSNG_01095 | SSNG_03416 | 8-amino-7-oxononanoate synthase. | 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.666 |
EFL13843.1 | EFL16771.1 | SSNG_01095 | SSNG_04023 | 8-amino-7-oxononanoate synthase. | Adenosylmethionine-8-amino-7-oxononanoate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.823 |
EFL13843.1 | EFL17167.1 | SSNG_01095 | SSNG_04419 | 8-amino-7-oxononanoate synthase. | biotin-[acetyl-CoA-carboxylase] ligase. | 0.425 |
EFL13843.1 | EFL17932.1 | SSNG_01095 | SSNG_05184 | 8-amino-7-oxononanoate synthase. | Adenosylmethionine-8-amino-7-oxononanoate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.666 |
EFL13843.1 | bioA | SSNG_01095 | SSNG_01097 | 8-amino-7-oxononanoate synthase. | Adenosylmethionine-8-amino-7-oxononanoate transaminase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.996 |
EFL13843.1 | bioB | SSNG_01095 | SSNG_01096 | 8-amino-7-oxononanoate synthase. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.982 |
EFL13843.1 | bioD | SSNG_01095 | SSNG_01098 | 8-amino-7-oxononanoate synthase. | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.995 |
EFL13843.1 | kbl | SSNG_01095 | SSNG_00814 | 8-amino-7-oxononanoate synthase. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.847 |
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