STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL13984.1Phosphotransferase; Unextendable partial coding region. (364 aa)    
Predicted Functional Partners:
EFL13985.1
Conserved hypothetical protein.
 
  
 0.967
EFL13986.1
Conserved hypothetical protein.
 
  
 0.907
EFL16383.1
MaoC domain-containing protein dehydratase.
 
   0.643
EFL13956.1
Conserved hypothetical protein.
 
     0.591
EFL16753.1
pimeloyl-CoA dehydrogenase, large subunit.
  
   0.557
EFL13528.1
Lipid-transfer protein.
  
  0.544
EFL14595.1
pimeloyl-CoA dehydrogenase, large subunit.
  
   0.540
EFL13911.1
Conserved hypothetical protein.
  
     0.523
EFL13957.1
Lipid-transfer protein.
  
  0.521
EFL14587.1
Coenzyme A transferase; Overlaps another CDS with the same product name.
  
 
   0.521
Your Current Organism:
Streptomyces sp. C
NCBI taxonomy Id: 253839
Other names: S. sp. C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.