Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL15043.1 | EFL15044.1 | SSNG_02295 | SSNG_02296 | Conserved hypothetical protein. | MmcQ. | 0.745 |
EFL15043.1 | EFL15045.1 | SSNG_02295 | SSNG_02297 | Conserved hypothetical protein. | CBS domain-containing protein. | 0.761 |
EFL15043.1 | EFL15047.1 | SSNG_02295 | SSNG_02299 | Conserved hypothetical protein. | Phosphate starvation-induced protein. | 0.873 |
EFL15043.1 | EFL15048.1 | SSNG_02295 | SSNG_02300 | Conserved hypothetical protein. | Carbohydrate kinase. | 0.769 |
EFL15043.1 | EFL15050.1 | SSNG_02295 | SSNG_02302 | Conserved hypothetical protein. | Hit-family protein. | 0.601 |
EFL15043.1 | era | SSNG_02295 | SSNG_02290 | Conserved hypothetical protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.921 |
EFL15043.1 | rnz | SSNG_02295 | SSNG_02301 | Conserved hypothetical protein. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.604 |
EFL15043.1 | ybeY | SSNG_02295 | SSNG_02298 | Conserved hypothetical protein. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.953 |
EFL15044.1 | EFL15043.1 | SSNG_02296 | SSNG_02295 | MmcQ. | Conserved hypothetical protein. | 0.745 |
EFL15044.1 | EFL15045.1 | SSNG_02296 | SSNG_02297 | MmcQ. | CBS domain-containing protein. | 0.895 |
EFL15044.1 | EFL15047.1 | SSNG_02296 | SSNG_02299 | MmcQ. | Phosphate starvation-induced protein. | 0.885 |
EFL15044.1 | EFL15048.1 | SSNG_02296 | SSNG_02300 | MmcQ. | Carbohydrate kinase. | 0.695 |
EFL15044.1 | EFL15050.1 | SSNG_02296 | SSNG_02302 | MmcQ. | Hit-family protein. | 0.594 |
EFL15044.1 | EFL15822.1 | SSNG_02296 | SSNG_03074 | MmcQ. | uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase. | 0.551 |
EFL15044.1 | EFL19247.1 | SSNG_02296 | SSNG_06499 | MmcQ. | NovD. | 0.598 |
EFL15044.1 | era | SSNG_02296 | SSNG_02290 | MmcQ. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.557 |
EFL15044.1 | rnz | SSNG_02296 | SSNG_02301 | MmcQ. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.628 |
EFL15044.1 | ybeY | SSNG_02296 | SSNG_02298 | MmcQ. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.895 |
EFL15045.1 | EFL15043.1 | SSNG_02297 | SSNG_02295 | CBS domain-containing protein. | Conserved hypothetical protein. | 0.761 |
EFL15045.1 | EFL15044.1 | SSNG_02297 | SSNG_02296 | CBS domain-containing protein. | MmcQ. | 0.895 |
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