STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL15226.1Conserved hypothetical protein. (268 aa)    
Predicted Functional Partners:
EFL15227.1
TetR-family transcriptional regulator.
       0.816
EFL14869.1
Conserved hypothetical protein.
  
     0.755
EFL15228.1
Acetyl/propionyl CoA carboxylase.
       0.739
EFL15230.1
hydroxymethylglutaryl-CoA lyase.
       0.721
EFL17890.1
Conserved hypothetical protein.
  
     0.709
EFL16296.1
Conserved hypothetical protein.
  
     0.702
EFL15565.1
Conserved hypothetical protein.
  
     0.695
EFL13644.1
Conserved hypothetical protein.
  
     0.693
EFL15102.1
Rod shape-determining protein MreD.
  
     0.691
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
 
    0.686
Your Current Organism:
Streptomyces sp. C
NCBI taxonomy Id: 253839
Other names: S. sp. C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.