Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL15540.1 | EFL15542.1 | SSNG_02792 | SSNG_02794 | Dipeptidase. | Transposase. | 0.519 |
EFL15540.1 | purE | SSNG_02792 | SSNG_02793 | Dipeptidase. | Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.926 |
EFL15542.1 | EFL15540.1 | SSNG_02794 | SSNG_02792 | Transposase. | Dipeptidase. | 0.519 |
EFL15542.1 | EFL17047.1 | SSNG_02794 | SSNG_04299 | Transposase. | Predicted protein. | 0.762 |
EFL15542.1 | EFL17068.1 | SSNG_02794 | SSNG_04320 | Transposase. | Resolvase. | 0.617 |
EFL15542.1 | EFL17303.1 | SSNG_02794 | SSNG_04555 | Transposase. | Transposase; Unextendable partial coding region. | 0.771 |
EFL15542.1 | EFL18369.1 | SSNG_02794 | SSNG_05621 | Transposase. | Transposase IS200-family protein; Truncated CDS. | 0.766 |
EFL15542.1 | EFL20264.1 | SSNG_02794 | SSNG_07516 | Transposase. | Conserved hypothetical protein. | 0.599 |
EFL15542.1 | purE | SSNG_02794 | SSNG_02793 | Transposase. | Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.519 |
EFL17047.1 | EFL15542.1 | SSNG_04299 | SSNG_02794 | Predicted protein. | Transposase. | 0.762 |
EFL17047.1 | EFL17068.1 | SSNG_04299 | SSNG_04320 | Predicted protein. | Resolvase. | 0.580 |
EFL17047.1 | EFL17303.1 | SSNG_04299 | SSNG_04555 | Predicted protein. | Transposase; Unextendable partial coding region. | 0.731 |
EFL17047.1 | EFL18369.1 | SSNG_04299 | SSNG_05621 | Predicted protein. | Transposase IS200-family protein; Truncated CDS. | 0.722 |
EFL17047.1 | EFL20264.1 | SSNG_04299 | SSNG_07516 | Predicted protein. | Conserved hypothetical protein. | 0.599 |
EFL17068.1 | EFL15542.1 | SSNG_04320 | SSNG_02794 | Resolvase. | Transposase. | 0.617 |
EFL17068.1 | EFL17047.1 | SSNG_04320 | SSNG_04299 | Resolvase. | Predicted protein. | 0.580 |
EFL17068.1 | EFL17303.1 | SSNG_04320 | SSNG_04555 | Resolvase. | Transposase; Unextendable partial coding region. | 0.445 |
EFL17068.1 | EFL18369.1 | SSNG_04320 | SSNG_05621 | Resolvase. | Transposase IS200-family protein; Truncated CDS. | 0.442 |
EFL17303.1 | EFL15542.1 | SSNG_04555 | SSNG_02794 | Transposase; Unextendable partial coding region. | Transposase. | 0.771 |
EFL17303.1 | EFL17047.1 | SSNG_04555 | SSNG_04299 | Transposase; Unextendable partial coding region. | Predicted protein. | 0.731 |
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