STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL16588.1Acetyltransferase. (159 aa)    
Predicted Functional Partners:
EFL16589.1
Conserved hypothetical protein.
       0.791
EFL16587.1
FAD dependent oxidoreductase.
       0.776
EFL17719.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
  0.567
EFL17535.1
RNA polymerase sigma-F factor; Belongs to the sigma-70 factor family.
       0.557
EFL17536.1
Anti-sigma factor.
       0.557
EFL17539.1
Deaminase.
       0.557
EFL19090.1
Predicted protein.
       0.557
EFL19813.1
Streptomycin 6-phosphotransferase StrA.
       0.557
EFL19608.1
Phosphoribulokinase/uridine kinase.
       0.553
EFL14247.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.537
Your Current Organism:
Streptomyces sp. C
NCBI taxonomy Id: 253839
Other names: S. sp. C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.