Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL13670.1 | EFL17335.1 | SSNG_00922 | SSNG_04587 | Integral membrane protein; Unextendable partial coding region. | Conserved hypothetical protein. | 0.535 |
EFL13670.1 | EFL17337.1 | SSNG_00922 | SSNG_04589 | Integral membrane protein; Unextendable partial coding region. | Conserved hypothetical protein. | 0.481 |
EFL13670.1 | EFL17714.1 | SSNG_00922 | SSNG_04966 | Integral membrane protein; Unextendable partial coding region. | Conserved hypothetical protein. | 0.586 |
EFL16189.1 | EFL17335.1 | SSNG_03441 | SSNG_04587 | NHL repeat containing protein. | Conserved hypothetical protein. | 0.458 |
EFL17334.1 | EFL17335.1 | SSNG_04586 | SSNG_04587 | Magnesium or manganese-dependent protein phosphatase. | Conserved hypothetical protein. | 0.733 |
EFL17334.1 | EFL17339.1 | SSNG_04586 | SSNG_04591 | Magnesium or manganese-dependent protein phosphatase. | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.557 |
EFL17334.1 | EFL17340.1 | SSNG_04586 | SSNG_04592 | Magnesium or manganese-dependent protein phosphatase. | Conserved hypothetical protein; Truncated CDS; unextendable partial coding region. | 0.557 |
EFL17334.1 | EFL19824.1 | SSNG_04586 | SSNG_07077 | Magnesium or manganese-dependent protein phosphatase. | Predicted protein. | 0.518 |
EFL17334.1 | fumC | SSNG_04586 | SSNG_04588 | Magnesium or manganese-dependent protein phosphatase. | Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.681 |
EFL17335.1 | EFL13670.1 | SSNG_04587 | SSNG_00922 | Conserved hypothetical protein. | Integral membrane protein; Unextendable partial coding region. | 0.535 |
EFL17335.1 | EFL16189.1 | SSNG_04587 | SSNG_03441 | Conserved hypothetical protein. | NHL repeat containing protein. | 0.458 |
EFL17335.1 | EFL17334.1 | SSNG_04587 | SSNG_04586 | Conserved hypothetical protein. | Magnesium or manganese-dependent protein phosphatase. | 0.733 |
EFL17335.1 | EFL17337.1 | SSNG_04587 | SSNG_04589 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.547 |
EFL17335.1 | EFL17339.1 | SSNG_04587 | SSNG_04591 | Conserved hypothetical protein. | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.557 |
EFL17335.1 | EFL17340.1 | SSNG_04587 | SSNG_04592 | Conserved hypothetical protein. | Conserved hypothetical protein; Truncated CDS; unextendable partial coding region. | 0.557 |
EFL17335.1 | EFL17341.1 | SSNG_04587 | SSNG_04593 | Conserved hypothetical protein. | WhiB-family transcriptional regulator. | 0.540 |
EFL17335.1 | EFL17714.1 | SSNG_04587 | SSNG_04966 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.560 |
EFL17335.1 | EFL19824.1 | SSNG_04587 | SSNG_07077 | Conserved hypothetical protein. | Predicted protein. | 0.557 |
EFL17335.1 | fumC | SSNG_04587 | SSNG_04588 | Conserved hypothetical protein. | Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.779 |
EFL17337.1 | EFL13670.1 | SSNG_04589 | SSNG_00922 | Conserved hypothetical protein. | Integral membrane protein; Unextendable partial coding region. | 0.481 |
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