STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL19051.1Integral membrane protein. (299 aa)    
Predicted Functional Partners:
EFL19052.1
Nodulation ABC transporter NodI.
 
  0.980
EFL19053.1
ABC transporter ATP-binding protein.
 
  0.918
EFL13209.1
Lipoprotein.
  
 
 0.837
EFL14299.1
Predicted protein.
  
 
 0.837
EFL16901.1
Conserved hypothetical protein.
 
     0.762
EFL17685.1
ABC transporter integral membrane subunit.
 
  0.672
EFL13860.1
Conserved hypothetical protein.
 
  0.665
EFL13581.1
ABC transporter ATP-binding protein.
  
 0.648
EFL14402.1
ABC transporter ATP-binding protein.
  
 0.648
EFL17683.1
ABC transporter integral membrane subunit.
 
  0.645
Your Current Organism:
Streptomyces sp. C
NCBI taxonomy Id: 253839
Other names: S. sp. C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.