STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL19862.1Predicted protein. (281 aa)    
Predicted Functional Partners:
EFL19861.1
NUDIX hydrolase; Truncated CDS; unextendable partial coding region.
 
     0.885
EFL19863.1
Predicted protein.
 
 
   0.854
EFL19864.1
Predicted protein.
       0.799
EFL19860.1
Transposase.
       0.773
EFL19865.1
Major facilitator protein.
       0.664
EFL19866.1
Predicted protein.
       0.664
EFL14445.1
Magnesium chelatase ATPase subunit I.
  
 0.663
EFL14446.1
Chelatase.
  
 0.663
EFL19867.1
NUDIX hydrolase.
 
     0.660
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
  0.621
Your Current Organism:
Streptomyces sp. C
NCBI taxonomy Id: 253839
Other names: S. sp. C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.