STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20026.1TtrA. (888 aa)    
Predicted Functional Partners:
EFL20027.1
Conserved hypothetical protein.
       0.784
EFL14088.1
Secreted protein.
  
     0.684
EFL16248.1
Conserved hypothetical protein.
  
     0.640
EFL13597.1
Conserved hypothetical protein.
  
     0.626
EFL14474.1
Conserved hypothetical protein.
  
     0.604
EFL17514.1
Conserved hypothetical protein.
  
     0.589
EFL16582.1
Integral membrane protein.
  
     0.573
EFL20028.1
Conserved hypothetical protein.
       0.560
EFL16471.1
Sporulation associated protein; Overlaps another CDS with the same product name.
  
     0.551
EFL17458.1
Conserved hypothetical protein.
  
     0.549
Your Current Organism:
Streptomyces sp. C
NCBI taxonomy Id: 253839
Other names: S. sp. C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.