STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20223.1Nodulation ABC transporter NodI. (317 aa)    
Predicted Functional Partners:
EFL20224.1
Predicted protein.
 
  
 0.961
EFL15844.1
ABC transporter permease.
 
  
 0.660
EFL18591.1
Urea ABC transporter, ATP-binding protein UrtE.
   
 
0.660
EFL18592.1
Conserved hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
    
  0.660
EFL18593.1
Conserved hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
    
  0.660
EFL14848.1
ABC transporter transmembrane component.
 
 0.628
EFL15819.1
ABC-type multidrug transport system.
 
 0.623
EFL14306.1
ABC-transporter transmembrane protein.
 
 
 0.604
EFL13371.1
Predicted protein.
  
  0.596
EFL16354.1
Integral membrane protein.
  
  0.596
Your Current Organism:
Streptomyces sp. C
NCBI taxonomy Id: 253839
Other names: S. sp. C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.