STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIP95987.1Starch-binding associating with outer membrane. (547 aa)    
Predicted Functional Partners:
SIP95959.1
TonB-linked outer membrane protein, SusC/RagA family.
 
   
 0.948
parB
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
   
 
 0.678
SIR24399.1
ParB-like nuclease domain-containing protein.
   
 
 0.678
SIQ31245.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.616
SIQ35776.1
ParB-like nuclease domain-containing protein.
   
 
 0.615
SIQ31285.1
Starch-binding associating with outer membrane.
  
 
   0.607
SIQ82731.1
Outer membrane cobalamin receptor protein.
  
 
   0.588
SIR35409.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.579
SIQ02897.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.560
SIQ23935.1
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region.
  
     0.554
Your Current Organism:
Chryseobacterium indoltheticum
NCBI taxonomy Id: 254
Other names: ATCC 27950, Beneckea indolthetica, C. indoltheticum, CCUG 33445, CIP 103168, Chryseobacterium indolitheticum, Flavobacterium indoltheticum, LMG 4025, LMG:4025
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.