Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ08886.1 | SIQ08912.1 | SAMN05421682_102305 | SAMN05421682_102306 | Aspartate aminotransferase. | Four helix bundle protein. | 0.501 |
SIQ08886.1 | SIQ08965.1 | SAMN05421682_102305 | SAMN05421682_102308 | Aspartate aminotransferase. | Hypothetical protein. | 0.423 |
SIQ08886.1 | pgcA | SAMN05421682_102305 | SAMN05421682_102307 | Aspartate aminotransferase. | Phosphoglucomutase. | 0.470 |
SIQ08912.1 | SIQ08886.1 | SAMN05421682_102306 | SAMN05421682_102305 | Four helix bundle protein. | Aspartate aminotransferase. | 0.501 |
SIQ08912.1 | SIQ08965.1 | SAMN05421682_102306 | SAMN05421682_102308 | Four helix bundle protein. | Hypothetical protein. | 0.636 |
SIQ08912.1 | SIQ08992.1 | SAMN05421682_102306 | SAMN05421682_102309 | Four helix bundle protein. | Putative auto-transporter adhesin, head GIN domain. | 0.494 |
SIQ08912.1 | SIQ09015.1 | SAMN05421682_102306 | SAMN05421682_102310 | Four helix bundle protein. | Hypothetical protein. | 0.494 |
SIQ08912.1 | SIQ09068.1 | SAMN05421682_102306 | SAMN05421682_102312 | Four helix bundle protein. | Protein of unknown function. | 0.473 |
SIQ08912.1 | arnC_1 | SAMN05421682_102306 | SAMN05421682_102311 | Four helix bundle protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.494 |
SIQ08912.1 | pgcA | SAMN05421682_102306 | SAMN05421682_102307 | Four helix bundle protein. | Phosphoglucomutase. | 0.671 |
SIQ08965.1 | SIQ08886.1 | SAMN05421682_102308 | SAMN05421682_102305 | Hypothetical protein. | Aspartate aminotransferase. | 0.423 |
SIQ08965.1 | SIQ08912.1 | SAMN05421682_102308 | SAMN05421682_102306 | Hypothetical protein. | Four helix bundle protein. | 0.636 |
SIQ08965.1 | SIQ08992.1 | SAMN05421682_102308 | SAMN05421682_102309 | Hypothetical protein. | Putative auto-transporter adhesin, head GIN domain. | 0.592 |
SIQ08965.1 | SIQ09015.1 | SAMN05421682_102308 | SAMN05421682_102310 | Hypothetical protein. | Hypothetical protein. | 0.592 |
SIQ08965.1 | SIQ09068.1 | SAMN05421682_102308 | SAMN05421682_102312 | Hypothetical protein. | Protein of unknown function. | 0.566 |
SIQ08965.1 | arnC_1 | SAMN05421682_102308 | SAMN05421682_102311 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.592 |
SIQ08965.1 | pgcA | SAMN05421682_102308 | SAMN05421682_102307 | Hypothetical protein. | Phosphoglucomutase. | 0.732 |
SIQ08992.1 | SIQ08912.1 | SAMN05421682_102309 | SAMN05421682_102306 | Putative auto-transporter adhesin, head GIN domain. | Four helix bundle protein. | 0.494 |
SIQ08992.1 | SIQ08965.1 | SAMN05421682_102309 | SAMN05421682_102308 | Putative auto-transporter adhesin, head GIN domain. | Hypothetical protein. | 0.592 |
SIQ08992.1 | SIQ09015.1 | SAMN05421682_102309 | SAMN05421682_102310 | Putative auto-transporter adhesin, head GIN domain. | Hypothetical protein. | 0.773 |
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