Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ04450.1 | SIQ06415.1 | SAMN05421682_102139 | SAMN05421682_102212 | Hypothetical protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.738 |
SIQ04450.1 | SIQ10964.1 | SAMN05421682_102139 | SAMN05421682_102393 | Hypothetical protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.746 |
SIQ04450.1 | SIQ24678.1 | SAMN05421682_102139 | SAMN05421682_103294 | Hypothetical protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.635 |
SIQ04450.1 | SIQ91395.1 | SAMN05421682_102139 | SAMN05421682_1109 | Hypothetical protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.686 |
SIQ04450.1 | SIR02606.1 | SAMN05421682_102139 | SAMN05421682_11194 | Hypothetical protein. | Peptidase family C25. | 0.787 |
SIQ04450.1 | SIR28564.1 | SAMN05421682_102139 | SAMN05421682_11674 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SIQ06415.1 | SIQ04450.1 | SAMN05421682_102212 | SAMN05421682_102139 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.738 |
SIQ06415.1 | SIQ10964.1 | SAMN05421682_102212 | SAMN05421682_102393 | Outer membrane receptor proteins, mostly Fe transport. | Por secretion system C-terminal sorting domain-containing protein. | 0.680 |
SIQ06415.1 | SIQ24678.1 | SAMN05421682_102212 | SAMN05421682_103294 | Outer membrane receptor proteins, mostly Fe transport. | Por secretion system C-terminal sorting domain-containing protein. | 0.607 |
SIQ06415.1 | SIQ91395.1 | SAMN05421682_102212 | SAMN05421682_1109 | Outer membrane receptor proteins, mostly Fe transport. | Por secretion system C-terminal sorting domain-containing protein. | 0.621 |
SIQ06415.1 | SIR02606.1 | SAMN05421682_102212 | SAMN05421682_11194 | Outer membrane receptor proteins, mostly Fe transport. | Peptidase family C25. | 0.734 |
SIQ06415.1 | SIR28564.1 | SAMN05421682_102212 | SAMN05421682_11674 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.746 |
SIQ10964.1 | SIQ04450.1 | SAMN05421682_102393 | SAMN05421682_102139 | Por secretion system C-terminal sorting domain-containing protein. | Hypothetical protein. | 0.746 |
SIQ10964.1 | SIQ06415.1 | SAMN05421682_102393 | SAMN05421682_102212 | Por secretion system C-terminal sorting domain-containing protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.680 |
SIQ10964.1 | SIQ24678.1 | SAMN05421682_102393 | SAMN05421682_103294 | Por secretion system C-terminal sorting domain-containing protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.754 |
SIQ10964.1 | SIQ91395.1 | SAMN05421682_102393 | SAMN05421682_1109 | Por secretion system C-terminal sorting domain-containing protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.744 |
SIQ10964.1 | SIR02606.1 | SAMN05421682_102393 | SAMN05421682_11194 | Por secretion system C-terminal sorting domain-containing protein. | Peptidase family C25. | 0.749 |
SIQ10964.1 | SIR03504.1 | SAMN05421682_102393 | SAMN05421682_111122 | Por secretion system C-terminal sorting domain-containing protein. | Hypothetical protein. | 0.777 |
SIQ10964.1 | SIR28564.1 | SAMN05421682_102393 | SAMN05421682_11674 | Por secretion system C-terminal sorting domain-containing protein. | Hypothetical protein. | 0.718 |
SIQ10964.1 | iphP_1 | SAMN05421682_102393 | SAMN05421682_102259 | Por secretion system C-terminal sorting domain-containing protein. | Protein-tyrosine phosphatase. | 0.730 |
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