STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ10964.1Por secretion system C-terminal sorting domain-containing protein. (532 aa)    
Predicted Functional Partners:
nuoM
NADH dehydrogenase subunit M.
    
 
 0.844
SIR03504.1
Hypothetical protein.
    
  0.777
SIQ24678.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.754
SIR02606.1
Peptidase family C25.
  
     0.749
SIQ04450.1
Hypothetical protein.
  
     0.746
SIQ91395.1
Por secretion system C-terminal sorting domain-containing protein.
  
  
  0.744
iphP_1
Protein-tyrosine phosphatase.
    
   0.730
iphP_2
Protein-tyrosine phosphatase.
    
   0.730
SIR28564.1
Hypothetical protein.
  
     0.718
SIQ06415.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.680
Your Current Organism:
Chryseobacterium indoltheticum
NCBI taxonomy Id: 254
Other names: ATCC 27950, Beneckea indolthetica, C. indoltheticum, CCUG 33445, CIP 103168, Chryseobacterium indolitheticum, Flavobacterium indoltheticum, LMG 4025, LMG:4025
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