STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ59778.1Conserved hypothetical phage tail region protein. (143 aa)    
Predicted Functional Partners:
SIQ59981.1
Rhs element Vgr protein.
 
 
   0.999
SIQ60080.1
Baseplate J-like protein.
 
 
 
 0.971
SIQ59811.1
Hypothetical protein.
 
 
 0.968
SIQ60111.1
Hypothetical protein.
 
 
 
 0.968
SIQ59744.1
Hypothetical protein.
 
 
 0.965
SIQ59675.1
Protein of unknown function.
 
 
 
 0.962
SIQ59946.1
Hypothetical protein.
 
   0.952
SIQ59708.1
Hypothetical protein.
 
 
 0.947
SIQ60045.1
Hypothetical protein.
 
 
   0.945
SIQ60180.1
Hypothetical protein.
 
 
   0.832
Your Current Organism:
Chryseobacterium indoltheticum
NCBI taxonomy Id: 254
Other names: ATCC 27950, Beneckea indolthetica, C. indoltheticum, CCUG 33445, CIP 103168, Chryseobacterium indolitheticum, Flavobacterium indoltheticum, LMG 4025, LMG:4025
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.