Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SIQ53328.1Uncharacterized conserved protein (COG2071). (235 aa)    
Predicted Functional Partners:
SIP87184.1
Glycosyltransferase, GT2 family.
  
     0.607
SIQ78270.1
Antitoxin component YwqK of the YwqJK toxin-antitoxin module.
  
     0.539
SIQ53370.1
Hypothetical protein.
       0.516
SIR01519.1
Protein of unknown function.
  
     0.510
SIQ53296.1
Protein of unknown function.
       0.509
SIP89476.1
Uncharacterized conserved protein YegJ, DUF2314 family.
  
     0.455
SIQ22677.1
HEAT repeat-containing protein.
  
     0.414
SIP87056.1
Hypothetical protein.
  
     0.412
Your Current Organism:
Chryseobacterium indoltheticum
NCBI taxonomy Id: 254
Other names: ATCC 27950, Beneckea indolthetica, C. indoltheticum, CCUG 33445, CIP 103168, Chryseobacterium indolitheticum, Flavobacterium indoltheticum, LMG 4025, LMG:4025
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