STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ65826.1OmpA-OmpF porin, OOP family. (369 aa)    
Predicted Functional Partners:
folK
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase.
       0.777
SIR07567.1
Outer membrane insertion C-terminal signal.
  
 
   0.774
SIP87894.1
Hypothetical protein.
  
     0.772
SIQ77454.1
Sporulation related domain-containing protein.
  
     0.770
SIR27936.1
Hypothetical protein.
  
     0.770
SIQ32917.1
Hypothetical protein.
  
     0.769
SIQ33028.1
Hypothetical protein.
  
     0.769
SIR04613.1
Hypothetical protein.
  
     0.766
SIP88973.1
Integral membrane protein.
  
     0.761
SIR13727.1
Outer membrane protein beta-barrel domain-containing protein.
  
 
   0.756
Your Current Organism:
Chryseobacterium indoltheticum
NCBI taxonomy Id: 254
Other names: ATCC 27950, Beneckea indolthetica, C. indoltheticum, CCUG 33445, CIP 103168, Chryseobacterium indolitheticum, Flavobacterium indoltheticum, LMG 4025, LMG:4025
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.