STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ99731.1Hypothetical protein. (934 aa)    
Predicted Functional Partners:
SIQ99689.1
Fn3-like domain-containing protein.
 
     0.944
kinB_2
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.838
barA_4
Signal transduction histidine kinase.
 
     0.789
SIQ24297.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.767
SIQ01521.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.762
SIQ99768.1
Hypothetical protein.
       0.762
SIR04727.1
Hypothetical protein.
  
     0.757
SIQ22496.1
Hypothetical protein.
  
     0.756
SIR32666.1
NTE family protein.
  
     0.730
SIQ34778.1
Bacteriophage abortive infection AbiH.
  
     0.729
Your Current Organism:
Chryseobacterium indoltheticum
NCBI taxonomy Id: 254
Other names: ATCC 27950, Beneckea indolthetica, C. indoltheticum, CCUG 33445, CIP 103168, Chryseobacterium indolitheticum, Flavobacterium indoltheticum, LMG 4025, LMG:4025
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.