STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR21914.1SH3 domain-containing protein. (280 aa)    
Predicted Functional Partners:
SIP88249.1
Hypothetical protein.
  
     0.696
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.632
prmA
Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
       0.601
yfaY
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.594
SIR10002.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.588
SIQ21927.1
N-acetylmuramoyl-L-alanine amidase.
  
  
  0.582
SIR21890.1
Hypothetical protein.
       0.580
SIQ43636.1
Protein of unknown function.
  
     0.511
SIP88265.1
Hypothetical protein.
  
     0.510
SIR33290.1
Prolyl oligopeptidase family protein.
  
     0.485
Your Current Organism:
Chryseobacterium indoltheticum
NCBI taxonomy Id: 254
Other names: ATCC 27950, Beneckea indolthetica, C. indoltheticum, CCUG 33445, CIP 103168, Chryseobacterium indolitheticum, Flavobacterium indoltheticum, LMG 4025, LMG:4025
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.