STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sglT_1Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (524 aa)    
Predicted Functional Partners:
barA_2
PAS domain S-box-containing protein.
   
 
 0.722
barA_1
Response regulator receiver domain-containing protein.
   
 
 0.722
SIQ10567.1
L-proline dehydrogenase.
 
  
 0.707
cstA
Carbon starvation protein.
  
    0.594
SIQ43014.1
BadF-type ATPase.
 
     0.555
SIR26997.1
Transposase IS200 like.
       0.550
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.549
barA_4
Signal transduction histidine kinase.
   
 
 0.531
SIR26905.1
Putative redox protein.
       0.414
SIR05103.1
Uncharacterized conserved protein YbbC, DUF1343 family.
     0.409
Your Current Organism:
Chryseobacterium indoltheticum
NCBI taxonomy Id: 254
Other names: ATCC 27950, Beneckea indolthetica, C. indoltheticum, CCUG 33445, CIP 103168, Chryseobacterium indolitheticum, Flavobacterium indoltheticum, LMG 4025, LMG:4025
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.