Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIR08506.1 | SIR28254.1 | SAMN05421682_11241 | SAMN05421682_11663 | ParE toxin of type II toxin-antitoxin system, parDE. | ParE toxin of type II toxin-antitoxin system, parDE. | 0.734 |
SIR08506.1 | SIR36400.1 | SAMN05421682_11241 | SAMN05421682_12017 | ParE toxin of type II toxin-antitoxin system, parDE. | Antitoxin ParD1/3/4. | 0.528 |
SIR10948.1 | SIR28254.1 | SAMN05421682_112144 | SAMN05421682_11663 | Plasmid stabilization system protein ParE. | ParE toxin of type II toxin-antitoxin system, parDE. | 0.591 |
SIR10948.1 | SIR36400.1 | SAMN05421682_112144 | SAMN05421682_12017 | Plasmid stabilization system protein ParE. | Antitoxin ParD1/3/4. | 0.528 |
SIR28254.1 | SIR08506.1 | SAMN05421682_11663 | SAMN05421682_11241 | ParE toxin of type II toxin-antitoxin system, parDE. | ParE toxin of type II toxin-antitoxin system, parDE. | 0.734 |
SIR28254.1 | SIR10948.1 | SAMN05421682_11663 | SAMN05421682_112144 | ParE toxin of type II toxin-antitoxin system, parDE. | Plasmid stabilization system protein ParE. | 0.591 |
SIR28254.1 | SIR28282.1 | SAMN05421682_11663 | SAMN05421682_11664 | ParE toxin of type II toxin-antitoxin system, parDE. | Hypothetical protein. | 0.773 |
SIR28254.1 | SIR28352.1 | SAMN05421682_11663 | SAMN05421682_11666 | ParE toxin of type II toxin-antitoxin system, parDE. | Proton-dependent oligopeptide transporter, POT family. | 0.438 |
SIR28254.1 | SIR36400.1 | SAMN05421682_11663 | SAMN05421682_12017 | ParE toxin of type II toxin-antitoxin system, parDE. | Antitoxin ParD1/3/4. | 0.528 |
SIR28254.1 | dtpA_1 | SAMN05421682_11663 | SAMN05421682_11665 | ParE toxin of type II toxin-antitoxin system, parDE. | Proton-dependent oligopeptide transporter, POT family. | 0.548 |
SIR28282.1 | SIR28254.1 | SAMN05421682_11664 | SAMN05421682_11663 | Hypothetical protein. | ParE toxin of type II toxin-antitoxin system, parDE. | 0.773 |
SIR28282.1 | dtpA_1 | SAMN05421682_11664 | SAMN05421682_11665 | Hypothetical protein. | Proton-dependent oligopeptide transporter, POT family. | 0.548 |
SIR28352.1 | SIR28254.1 | SAMN05421682_11666 | SAMN05421682_11663 | Proton-dependent oligopeptide transporter, POT family. | ParE toxin of type II toxin-antitoxin system, parDE. | 0.438 |
SIR28352.1 | dtpA_1 | SAMN05421682_11666 | SAMN05421682_11665 | Proton-dependent oligopeptide transporter, POT family. | Proton-dependent oligopeptide transporter, POT family. | 0.613 |
SIR36400.1 | SIR08506.1 | SAMN05421682_12017 | SAMN05421682_11241 | Antitoxin ParD1/3/4. | ParE toxin of type II toxin-antitoxin system, parDE. | 0.528 |
SIR36400.1 | SIR10948.1 | SAMN05421682_12017 | SAMN05421682_112144 | Antitoxin ParD1/3/4. | Plasmid stabilization system protein ParE. | 0.528 |
SIR36400.1 | SIR28254.1 | SAMN05421682_12017 | SAMN05421682_11663 | Antitoxin ParD1/3/4. | ParE toxin of type II toxin-antitoxin system, parDE. | 0.528 |
dtpA_1 | SIR28254.1 | SAMN05421682_11665 | SAMN05421682_11663 | Proton-dependent oligopeptide transporter, POT family. | ParE toxin of type II toxin-antitoxin system, parDE. | 0.548 |
dtpA_1 | SIR28282.1 | SAMN05421682_11665 | SAMN05421682_11664 | Proton-dependent oligopeptide transporter, POT family. | Hypothetical protein. | 0.548 |
dtpA_1 | SIR28352.1 | SAMN05421682_11665 | SAMN05421682_11666 | Proton-dependent oligopeptide transporter, POT family. | Proton-dependent oligopeptide transporter, POT family. | 0.613 |