STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL66126.1Ion channel. (148 aa)    
Predicted Functional Partners:
SFL66162.1
Protein of unknown function.
       0.668
SFL66061.1
Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist.
       0.593
SFL65998.1
Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.572
SFL66024.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.572
SFL66094.1
Uncharacterized protein, UPF0261 family.
       0.572
SFM03806.1
Putative NADPH-quinone reductase (modulator of drug activity B).
   
 
 0.532
SFL65966.1
Putative tricarboxylic transport membrane protein.
       0.504
SFL65933.1
Tripartite tricarboxylate transporter TctB family protein.
       0.498
SFM70484.1
Cardiolipin synthase; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
     
 0.474
gltS
glutamate:Na+ symporter, ESS family; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.
 
     0.441
Your Current Organism:
Shimia aestuarii
NCBI taxonomy Id: 254406
Other names: DSM 15283, IMSNU 14011, JCM 14332, KCTC 12049, Rhodobacteraceae bacterium JC2049, S. aestuarii, Thalassobius aestuarii, Thalassobius aestuarii Yi and Chun 2007, strain JC2049
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