Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFL64987.1 | SFL69668.1 | SAMN04488042_101994 | SAMN04488042_1011161 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family. | 0.519 |
| SFL64987.1 | SFM65865.1 | SAMN04488042_101994 | SAMN04488042_11189 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Ferredoxin-NADP reductase. | 0.575 |
| SFL69606.1 | SFL69624.1 | SAMN04488042_1011158 | SAMN04488042_1011159 | Hypothetical protein. | Uncharacterized protein. | 0.809 |
| SFL69606.1 | SFL69668.1 | SAMN04488042_1011158 | SAMN04488042_1011161 | Hypothetical protein. | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family. | 0.551 |
| SFL69606.1 | aroC | SAMN04488042_1011158 | SAMN04488042_1011160 | Hypothetical protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.796 |
| SFL69624.1 | SFL69606.1 | SAMN04488042_1011159 | SAMN04488042_1011158 | Uncharacterized protein. | Hypothetical protein. | 0.809 |
| SFL69624.1 | SFL69668.1 | SAMN04488042_1011159 | SAMN04488042_1011161 | Uncharacterized protein. | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family. | 0.551 |
| SFL69624.1 | aroC | SAMN04488042_1011159 | SAMN04488042_1011160 | Uncharacterized protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.817 |
| SFL69668.1 | SFL64987.1 | SAMN04488042_1011161 | SAMN04488042_101994 | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.519 |
| SFL69668.1 | SFL69606.1 | SAMN04488042_1011161 | SAMN04488042_1011158 | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family. | Hypothetical protein. | 0.551 |
| SFL69668.1 | SFL69624.1 | SAMN04488042_1011161 | SAMN04488042_1011159 | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family. | Uncharacterized protein. | 0.551 |
| SFL69668.1 | SFL69687.1 | SAMN04488042_1011161 | SAMN04488042_1011162 | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family. | Alcohol dehydrogenase, propanol-preferring. | 0.523 |
| SFL69668.1 | SFL88176.1 | SAMN04488042_1011161 | SAMN04488042_10212 | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family. | Reductive dehalogenase. | 0.559 |
| SFL69668.1 | SFM53343.1 | SAMN04488042_1011161 | SAMN04488042_108137 | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.559 |
| SFL69668.1 | SFM57894.1 | SAMN04488042_1011161 | SAMN04488042_10977 | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family. | Hypothetical protein; Belongs to the pirin family. | 0.634 |
| SFL69668.1 | SFM65865.1 | SAMN04488042_1011161 | SAMN04488042_11189 | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family. | Ferredoxin-NADP reductase. | 0.559 |
| SFL69668.1 | aroC | SAMN04488042_1011161 | SAMN04488042_1011160 | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.551 |
| SFL69668.1 | metG | SAMN04488042_1011161 | SAMN04488042_102318 | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.653 |
| SFL69687.1 | SFL69668.1 | SAMN04488042_1011162 | SAMN04488042_1011161 | Alcohol dehydrogenase, propanol-preferring. | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family. | 0.523 |
| SFL69687.1 | SFL88176.1 | SAMN04488042_1011162 | SAMN04488042_10212 | Alcohol dehydrogenase, propanol-preferring. | Reductive dehalogenase. | 0.637 |
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