STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM73419.1Putative transposase. (110 aa)    
Predicted Functional Partners:
SFM73384.1
Putative transposase.
     0.928
SFM73170.1
Transposase (or an inactivated derivative).
  
     0.690
SFM64719.1
Putative transposase.
  
     0.689
SFM63657.1
DDE domain-containing protein.
  
     0.680
SFM71915.1
Transposase (or an inactivated derivative).
  
     0.655
SFM63628.1
Putative transposase.
  
     0.615
SFM73343.1
Hypothetical protein.
       0.429
Your Current Organism:
Shimia aestuarii
NCBI taxonomy Id: 254406
Other names: DSM 15283, IMSNU 14011, JCM 14332, KCTC 12049, Rhodobacteraceae bacterium JC2049, S. aestuarii, Thalassobius aestuarii, Thalassobius aestuarii Yi and Chun 2007, strain JC2049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.