STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001439965_00159Unannotated protein. (559 aa)    
Predicted Functional Partners:
GCA_001439965_00745
Unannotated protein.
    
  0.899
GCA_001439965_02601
Unannotated protein.
 
 0.893
GCA_001439965_00260
Unannotated protein.
   
 0.867
GCA_001439965_02280
Unannotated protein.
   
 0.867
GCA_001439965_00405
Unannotated protein.
    
  0.830
GCA_001439965_01638
Unannotated protein.
    
  0.830
GCA_001439965_00730
Unannotated protein.
   
   0.775
GCA_001439965_00749
Unannotated protein.
    
   0.774
GCA_001439965_00762
Unannotated protein.
    
 
 0.774
GCA_001439965_00741
Unannotated protein.
    
   0.773
Your Current Organism:
Bacillus farraginis
NCBI taxonomy Id: 254757
Other names: B. farraginis, Bacillus farraginis Scheldeman et al. 2004, DSM 16013, LMG 22081, LMG:22081, strain R-6540
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.