Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A1V6S1Z8 | A0A1V6SDK1 | Uncharacterized protein. | Histone H2A; Belongs to the histone H2A family. | 0.681 |
A0A1V6S1Z8 | A0A1V6SMF2 | Uncharacterized protein. | Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation. | 0.803 |
A0A1V6S1Z8 | A0A1V6SMK2 | Uncharacterized protein. | SPRY domain-containing protein. | 0.842 |
A0A1V6S1Z8 | A0A1V6SQL3 | Uncharacterized protein. | TPR_REGION domain-containing protein. | 0.804 |
A0A1V6S1Z8 | A0A1V6SZ56 | Uncharacterized protein. | Histone domain-containing protein. | 0.724 |
A0A1V6S1Z8 | A0A1V6TAQ0 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.850 |
A0A1V6S1Z8 | A0A1V6TAQ1 | Uncharacterized protein. | CPSF_A domain-containing protein. | 0.681 |
A0A1V6S1Z8 | A0A1V6TAS5 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.694 |
A0A1V6S1Z8 | A0A1V6TC87 | Uncharacterized protein. | Histone H3; Belongs to the histone H3 family. | 0.724 |
A0A1V6S1Z8 | A0A1V6TSA4 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.694 |
A0A1V6SDK1 | A0A1V6S1Z8 | Histone H2A; Belongs to the histone H2A family. | Uncharacterized protein. | 0.681 |
A0A1V6SDK1 | A0A1V6SMF2 | Histone H2A; Belongs to the histone H2A family. | Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation. | 0.937 |
A0A1V6SDK1 | A0A1V6SMK2 | Histone H2A; Belongs to the histone H2A family. | SPRY domain-containing protein. | 0.947 |
A0A1V6SDK1 | A0A1V6SQL3 | Histone H2A; Belongs to the histone H2A family. | TPR_REGION domain-containing protein. | 0.587 |
A0A1V6SDK1 | A0A1V6SZ56 | Histone H2A; Belongs to the histone H2A family. | Histone domain-containing protein. | 0.973 |
A0A1V6SDK1 | A0A1V6TAQ0 | Histone H2A; Belongs to the histone H2A family. | WD_REPEATS_REGION domain-containing protein. | 0.948 |
A0A1V6SDK1 | A0A1V6TAQ1 | Histone H2A; Belongs to the histone H2A family. | CPSF_A domain-containing protein. | 0.515 |
A0A1V6SDK1 | A0A1V6TAS5 | Histone H2A; Belongs to the histone H2A family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.990 |
A0A1V6SDK1 | A0A1V6TC87 | Histone H2A; Belongs to the histone H2A family. | Histone H3; Belongs to the histone H3 family. | 0.979 |
A0A1V6SDK1 | A0A1V6TSA4 | Histone H2A; Belongs to the histone H2A family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.990 |
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