STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6SKH0Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
A0A1V6TWM3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.931
A0A1V6TEJ0
WD_REPEATS_REGION domain-containing protein.
    
 0.888
A0A1V6SPS8
Uncharacterized protein.
    
 0.874
A0A1V6SMC9
Uncharacterized protein.
   
 
 0.839
A0A1V6TLN0
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
 0.812
A0A1V6TX01
Uncharacterized protein.
    
 0.812
A0A1V6TX19
Hist_deacetyl domain-containing protein.
    
 0.812
A0A1V6U1G8
Uncharacterized protein.
    
 0.790
A0A1V6SHN6
Uncharacterized protein.
    
 0.768
A0A1V6TLR0
SANT domain-containing protein.
    
 0.768
Your Current Organism:
Penicillium flavigenum
NCBI taxonomy Id: 254877
Other names: CBS 419.89, IBT 21526, IBT 3091, IBT V1035, IMI 293207, P. flavigenum
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