STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6SQL0Uncharacterized protein. (355 aa)    
Predicted Functional Partners:
A0A1V6SKJ9
Uncharacterized protein.
   
 
 0.938
A0A1V6SKL6
PRA1 family protein.
   
 
 0.938
A0A1V6T8C4
ER lumen protein-retaining receptor.
   
 
 0.928
A0A1V6T8D8
Uncharacterized protein.
   
 
 0.899
A0A1V6SPQ6
GOLD domain-containing protein.
   
 
 0.849
A0A1V6TWN7
Uncharacterized protein.
   
   0.782
A0A1V6SD99
Uncharacterized protein.
    
 
 0.780
A0A1V6SU26
Protein YIP.
   
  
 0.727
A0A1V6SP40
Uncharacterized protein.
    
 
 0.726
A0A1V6TA52
Protein YOP1.
    
 
 0.686
Your Current Organism:
Penicillium flavigenum
NCBI taxonomy Id: 254877
Other names: CBS 419.89, IBT 21526, IBT 3091, IBT V1035, IMI 293207, P. flavigenum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.