Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6SQL3TPR_REGION domain-containing protein. (871 aa)    
Predicted Functional Partners:
A0A1V6SGS4
WD_REPEATS_REGION domain-containing protein.
   
 0.988
A0A1V6TYM7
BZIP domain-containing protein.
    
 0.979
A0A1V6S324
MADS-box domain-containing protein.
   
 0.974
A0A1V6S7M7
MADS-box domain-containing protein.
   
 0.974
A0A1V6SNW2
Uncharacterized protein.
    
 0.973
A0A1V6T727
PHD domain-containing protein.
    
 
 0.946
A0A1V6S1Z8
Uncharacterized protein.
    
 0.898
A0A1V6SGD4
WD_REPEATS_REGION domain-containing protein.
    
 0.898
A0A1V6SIZ8
Uncharacterized protein.
    
 0.898
A0A1V6T3X5
WD_REPEATS_REGION domain-containing protein.
    
 0.898
Your Current Organism:
Penicillium flavigenum
NCBI taxonomy Id: 254877
Other names: CBS 419.89, IBT 21526, IBT 3091, IBT V1035, IMI 293207, P. flavigenum
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