STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6T197Lactamase_B_4 domain-containing protein. (1042 aa)    
Predicted Functional Partners:
A0A1V6SZW0
Endonuclease.
   
   0.925
A0A1V6TFI8
WD_REPEATS_REGION domain-containing protein.
   
    0.789
A0A1V6U2Z7
Uncharacterized protein.
   
  
 0.787
A0A1V6TJ62
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
    
  0.713
A0A1V6U3I0
RNase_PH domain-containing protein.
  
 
 0.688
A0A1V6SXN8
Uncharacterized protein.
  
 
 0.684
A0A1V6TVN1
RNase_PH domain-containing protein.
  
 
 0.684
A0A1V6TCE9
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
  
 0.654
A0A1V6TIK6
Uncharacterized protein.
  
  
 0.640
A0A1V6SQ40
SpoU_sub_bind domain-containing protein.
  
 
 0.596
Your Current Organism:
Penicillium flavigenum
NCBI taxonomy Id: 254877
Other names: CBS 419.89, IBT 21526, IBT 3091, IBT V1035, IMI 293207, P. flavigenum
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