STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6T7X7Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (316 aa)    
Predicted Functional Partners:
A0A1V6SFX7
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.570
A0A1V6T3W1
Uncharacterized protein.
     
 0.568
A0A1V6STS2
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
  0.562
A0A1V6TDF0
Amino_oxidase domain-containing protein.
     
 0.559
A0A1V6TJ41
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.549
A0A1V6U479
Carrier domain-containing protein.
   
  0.546
A0A1V6SLF5
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
   
  0.544
A0A1V6TX22
Uncharacterized protein.
   
  0.544
A0A1V6SRF1
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.501
A0A1V6TX18
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
    
 0.493
Your Current Organism:
Penicillium flavigenum
NCBI taxonomy Id: 254877
Other names: CBS 419.89, IBT 21526, IBT 3091, IBT V1035, IMI 293207, P. flavigenum
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