STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6TF33Uncharacterized protein. (272 aa)    
Predicted Functional Partners:
A0A1V6TYN6
DNA ligase.
    
 0.636
A0A1V6TJT5
WD_REPEATS_REGION domain-containing protein.
    
  0.596
A0A1V6T9R9
TAF domain-containing protein.
    
  0.589
A0A1V6SGQ7
SCA7 domain-containing protein.
    
  0.580
A0A1V6SS94
TFIID_20kDa domain-containing protein.
    
  0.580
A0A1V6TFJ3
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.580
A0A1V6TAH3
Uncharacterized protein.
    
  0.579
A0A1V6U4U3
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
  0.579
A0A1V6SAA2
Uncharacterized protein.
    
  0.577
A0A1V6SNJ0
Uncharacterized protein.
    
 
 0.576
Your Current Organism:
Penicillium flavigenum
NCBI taxonomy Id: 254877
Other names: CBS 419.89, IBT 21526, IBT 3091, IBT V1035, IMI 293207, P. flavigenum
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