STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6U278ERCC4 domain-containing protein. (650 aa)    
Predicted Functional Partners:
A0A1V6SNF2
ERCC4 domain-containing protein.
  
 
 0.978
A0A1V6U335
Aamy domain-containing protein.
   
 0.878
A0A1V6TVG4
Uncharacterized protein.
    
 
 0.826
A0A1V6TS61
CBM21 domain-containing protein.
   
 0.805
A0A1V6TXU1
Uncharacterized protein; Belongs to the phosphohexose mutase family.
   
 0.794
A0A1V6SUK5
Uncharacterized protein.
    
 0.787
A0A1V6SWH9
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.786
A0A1V6TI48
Uncharacterized protein.
  
 0.760
A0A1V6TCN4
Uncharacterized protein.
    
 0.755
A0A1V6STT3
Uncharacterized protein.
    
 0.753
Your Current Organism:
Penicillium flavigenum
NCBI taxonomy Id: 254877
Other names: CBS 419.89, IBT 21526, IBT 3091, IBT V1035, IMI 293207, P. flavigenum
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